Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72847313 chr6:27730082 C/T RNF5P1 chr8:38458179-38458718:- 0.7 6.11 2.09E-9 Box Plot
THCA rs72847313 chr6:27730082 C/T ZFP57 chr6:29640169-29648887:- 0.89 8.31 9.98E-16 Box Plot
THCA rs72848286 chr11:3379072 A/G LAMA4 chr6:112429963-112576141:- 0.31 6.07 2.58E-9 Box Plot
THCA rs72848290 chr11:3392637 C/T LAMA4 chr6:112429963-112576141:- 0.31 5.96 4.95E-9 Box Plot
THCA rs7285118 chr22:35985165 A/G NOL12 chr22:38077680-38089485:+ -0.4 -5.97 4.6E-9 Box Plot
THCA rs72854513 chr6:28265954 A/T BTN3A2 chr6:26365387-26378548:+ -0.82 -11.75 3.4E-28 Box Plot
THCA rs72854513 chr6:28265954 A/T RNF5P1 chr8:38458179-38458718:- 0.7 6.25 8.95E-10 Box Plot
THCA rs72854513 chr6:28265954 A/T ZFP57 chr6:29640169-29648887:- 0.92 8.87 1.45E-17 Box Plot
THCA rs7285470 chr22:26088602 A/G LDOC1L chr22:44888452-44894178:- -0.41 -5.89 7.35E-9 Box Plot
THCA rs7285470 chr22:26088602 A/G NOL12 chr22:38077680-38089485:+ -0.48 -6.72 5.26E-11 Box Plot
THCA rs7285470 chr22:26088602 A/G POLR3H chr22:41921808-41940610:- -0.59 -6.12 1.95E-9 Box Plot
THCA rs7285470 chr22:26088602 A/G THAP7 chr22:21353393-21356485:- -0.44 -6.22 1.11E-9 Box Plot
THCA rs7285470 chr22:26088602 A/G ZMAT5 chr22:30126945-30163000:- -0.44 -6.2 1.19E-9 Box Plot
THCA rs7285787 chr22:24009362 C/T IGLL3 chr22:25713888-25716191:+ 0.71 10.08 8.63E-22 Box Plot
THCA rs72859866 chr2:132199551 G/A CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot